Version 1.0 of this model has been trained using thousands of pictures taken by Ryan Hennessy Wastewater MIcrobiology from a wide range of municipal and industrial wastewater treatment systems throughout predominantly the United States and Canada. The model has been trained for a high variety of microbe types and conditions which include the following list and recommended magnifications for optimal usage:
Microbe Type or Condition | Recommended Photo Options |
---|---|
Actinomycetes_Mycolata (includes Nocardioforms) | 1000x phase contrast oil immersion, Gram stain 1000x |
Anaerobic sulfur bacteria | 1000x phase contrast oil immersion |
Anaerobic filament morphotype B | 1000x phase contrast oil immersion |
Beggiatoa | 1000x phase contrast oil immersion or 400x phase contrast |
Bristleworm | 100x or 200x phase contrast or brightfield |
Crustacean | 4x, 100x, or 200x phase contrast or brightfield |
Dead filament | 1000x phase contrast oil immersion |
Dispersed growth high | 100x or 200x phase contrast |
Dispersed growth moderate | 100x or 200x phase contrast |
Dispersed growth low | 100x or 200x phase contrast |
Elevated polysaccharide | 100x, 200x, 400x reverse India ink |
Ferric iron | 100x, 200x, 400x, and 1000x phase contrast |
Fibrous material | 100x or 200x phase contrast, possibly 100x or 200x brightfield (lower probability of success) |
Filament bacteria impact on floc structure high | 100x or 200x phase contrast, possibly 100x or 200x brightfield and possibly 400x phase contrast and 400x brightfield |
Filamentous bacteria impact on floc structure moderate | 100x or 200x phase contrast, possibly 100x or 200x brightfield and possibly 400x phase contrast and 400x brightfield |
Filamentous bacteria impact on floc structure low | 100x or 200x phase contrast, possibly 100x or 200x brightfield and possibly 400x phase contrast and 400x brightfield |
Note | It is highly likely that at lower power magnification (100x, 200x) that the machine learning may recognize multiple conditions and lower % (i.e., dispersed growth and floc structure) |
Flagellate | 100x phase contrast, 100x brightfield, 200x phase contrast, 200x brightfield, 400x phase contrast, 400x brightfield, 1000x phase contrast, 1000x brightfield |
Flexibacter | 1000x phase contrast, possibly 1000x brightfield |
Floc open/diffuse | 100x or 200x phase contrast, possibly 100x or 200x brightfield and possibly 400x phase contrast and 400x brightfield |
Floc strong | 100x or 200x phase contrast, possibly 100x or 200x brightfield and possibly 400x phase contrast and 400x brightfield |
Floc weak | 100x or 200x phase contrast, possibly 100x or 200x brightfield and possibly 400x phase contrast and 400x brightfield |
Free swimming ciliate | 100x, 200x, 400x, and 1000x phase contrast and brightfield |
Fungi | 100x, 200x, 400x, and 1000x phase contrast and likely brightfield |
GAO | 1000x Neisser |
Gastrotrich | 100x, 200x, 400x, and 1000x phase contrast |
Grease | 100x phase contrast cropped, 200x phase contrast 1000x phase contrast |
Haliscomenobacter | 1000x phase contrast |
Hyphomicrobium | 1000x phase contrast |
Inert material | 200x phase contrast possibly 200x brightfield |
Iron sulfide | 100x phase contrast cropped, 200x, 400x, and 1000x phase contrast |
Irregular growth formations | 1000x phase contrast |
Microscrilla | 1000x phase contrast |
Microthrix | Gram stain 1000x, 1000x phase contrast, Neisser 1000x (limited success) |
Normal polysaccharide | 100x, 200x, 400x reverse India ink |
Nostocoida limicola | 1000x phase contrast, moderate accuracy at 1000x Gram stain and 1000x Neisser stain |
Oil | 1000x phase contrast |
Thiopedia | 1000x phase contrast |
Thiothrix | 1000x phase contrast |
Type 021N | 1000x phase contrast, possibly 400x phase contrast and 1000x brightfield |
Type 0041/0675 | 1000x phase contrast |
Type 0092 | Neisser 1000x |
Type 0581_Chloroflexi | Best at Gram stain 1000x, low likelihood of recognition at 1000x phase contrast |
Type 0914/0803 | 1000x phase contrast |
Type 0961 | 1000x phase contrast |
Type 1851 | 1000x phase contrast |
Type 1863 | 1000x phase contrast, 1000x Gram stain |
Water Bear | 100x, 200x, 400x, 1000x phase contrast and brightfield |
Yeast | 400x phase contrast, 1000x phase contrast |
Zoogloea | 100x phase contrast (low success), 200x, 400x, and 1000x phase contrast |